Package de.unirostock.sems.bives.sbml.parser

Class SBMLDocument

java.lang.Object

de.unirostock.sems.bives.ds.ModelDocument

de.unirostock.sems.bives.sbml.parser.SBMLDocument

public class SBMLDocument
extends de.unirostock.sems.bives.ds.ModelDocument

The Class SBMLDocument representing a document holding an SBMLModel.

Author:

Martin Scharm

Field Summary

Fields inherited from class de.unirostock.sems.bives.ds.ModelDocument

doc

Constructor Summary

Constructors

Constructor	Description
SBMLDocument(de.unirostock.sems.xmlutils.ds.TreeDocument doc)	Instantiates a new SBML document.

Method Summary

Modifier and Type	Method	Description
void	flatten()
int	getLevel()	Gets the level.
SBMLModel	getModel()	Gets the model.
int	getVersion()	Gets the version.

Methods inherited from class de.unirostock.sems.bives.ds.ModelDocument

getBaseUri, getTreeDocument

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SBMLDocument

public SBMLDocument(de.unirostock.sems.xmlutils.ds.TreeDocument doc)
             throws BivesSBMLParseException,
                    de.unirostock.sems.bives.exception.BivesDocumentConsistencyException

Instantiates a new SBML document.

Parameters:

doc - the XML document

Throws:

BivesSBMLParseException - the bives sbml parse exception

de.unirostock.sems.bives.exception.BivesDocumentConsistencyException - the bives document consistency exception

Method Detail

getLevel

public int getLevel()

Gets the level.

Returns:

the level

getVersion

public int getVersion()

Gets the version.

Returns:

the version

getModel

public SBMLModel getModel()

Gets the model.

Returns:

the model

flatten

public void flatten()
             throws Exception

Specified by:

flatten in class de.unirostock.sems.bives.ds.ModelDocument

Throws:

Exception